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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3138020_3138118_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3138020 - 3138118

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGA|GCAACGATT

5'SS Class:

weak_major

3'SS Sequence:

AATTATGTGAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AGAGCTTTAATT

Flanking Amino Acid:

RERVIEEKYFEHFFSQLSL*

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.09

1.4

70.5

40.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

52.1

0.05

1.3

52.5

45.2

Minor 5ss

34.7

-1.7

4.3

53.6

44.6

Minor BPS

63.9

0.51

1.4

71.73

39.6

Associated Gene:

Gene:

CALR3

Ensembl Gene ID:

ENSAPLG00000010728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011163

3137992 - 3141903

3912