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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3138169_3138306_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3138169 - 3138306

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTACATGAA

5'SS Class:

weak_major

3'SS Sequence:

GAACATCAGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GGATCCCGAAAA

Flanking Amino Acid:

GDETWGETKVTEEEQERERV

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.1

57.5

35.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

1.1

43.9

41.8

Minor 5ss

32.1

-2

3.5

40.2

41.6

Minor BPS

47.1

-0.2

1.9

57.85

40.1

Associated Gene:

Gene:

CALR3

Ensembl Gene ID:

ENSAPLG00000010728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011163

3137992 - 3141903

3912