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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3138403_3139080_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3138403 - 3139080

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

CTTTCCTCAAAG

Flanking Amino Acid:

ISIIGLDIWQVRAGTIFDNF

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

80.2

30.7

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

73.6

0.53

74.6

Minor 5ss

34.1

-1.8

2.8

40.8

45.4

Minor BPS

63.3

0.28

1.8

69.15

43.9

Associated Gene:

Gene:

CALR3

Ensembl Gene ID:

ENSAPLG00000010728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011163

3137992 - 3141903

3912