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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3139429_3139556_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3139429 - 3139556

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTGG

5'SS Class:

strong_major

3'SS Sequence:

TACCTTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

CTTTCTTTAACC

Flanking Amino Acid:

IDDPNDIKPEDWDEPEYIMD

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.1

69.7

43.7

Major BPS

74.7

0.61

65.9

40.9

Major PPT

73.3

0.52

34.1

Minor 5ss

45.1

-0.5

2.6

58.7

45.8

Minor BPS

84.6

1.06

85.93

32.4

Associated Gene:

Gene:

CALR3

Ensembl Gene ID:

ENSAPLG00000010728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011163

3137992 - 3141903

3912