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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3139767_3140509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3139767 - 3140509

Intron Length:

743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTAAAACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTTCTTTAAAA

Flanking Amino Acid:

HPIKKPIRCKVDGYTHLYTL

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

65.4

0.35

56.2

42.5

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

75.7

0.8

1.3

80.33

35.6

Associated Gene:

Gene:

CALR3

Ensembl Gene ID:

ENSAPLG00000010728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011163

3137992 - 3141903

3912