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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3140605_3141205_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3140605 - 3141205

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TATCTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAA

U12 Branch Point Sequence:

AGCCTGTTATCT

Flanking Amino Acid:

SGDSRYYIMFGPDICGSETK

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

81.9

26.2

Major BPS

70.7

0.51

0.9

61.7

35.7

Major PPT

82.1

0.72

0.7

77.6

30.7

Minor 5ss

38.5

-1.3

2.9

45.9

43.7

Minor BPS

44.1

-0.3

2.2

59.89

43.6

Associated Gene:

Gene:

CALR3

Ensembl Gene ID:

ENSAPLG00000010728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011163

3137992 - 3141903

3912