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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3142331_3142500_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3142331 - 3142500

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

GGAGCCTCACTC

Flanking Amino Acid:

AGRALVGGEQGHGDAQRWRT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

64.3

0.32

35.1

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

44.4

-0.4

1.8

41.1

Associated Gene:

Gene:

C19orf44

Ensembl Gene ID:

ENSAPLG00000010741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011177

3142283 - 3145948

3666