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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3143140_3143383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3143140 - 3143383

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTTAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTCTTTAAAA

Flanking Amino Acid:

GTSDSKWSGKSKAPVSLGTS

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

71.3

40.5

Major BPS

100

1.24

0.5

100

Major PPT

69.4

0.44

1.1

71.8

37.2

Minor 5ss

38.1

-1.3

49.1

46.7

Minor BPS

76.8

0.84

1.3

81.56

33.1

Associated Gene:

Gene:

C19orf44

Ensembl Gene ID:

ENSAPLG00000010741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011177

3142283 - 3145948

3666