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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3145198_3145317_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3145198 - 3145317

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAG

U12 Branch Point Sequence:

TGATCTGTTACT

Flanking Amino Acid:

SHIISMDAVEALTAYNPSVL

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

76.8

33.4

Major BPS

62.8

0.32

1.5

69.9

35.3

Major PPT

92.3

0.95

0.6

88.3

21.5

Minor 5ss

31.6

-2.1

3.1

39.6

45.9

Minor BPS

49.2

0.02

2.3

73.34

43.3

Associated Gene:

Gene:

C19orf44

Ensembl Gene ID:

ENSAPLG00000010741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011177

3142283 - 3145948

3666