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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3145485_3145861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3145485 - 3145861

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGATAG

5'SS Class:

strong_major

3'SS Sequence:

AATTCTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GGTGTATTAATT

Flanking Amino Acid:

HYHTLEEAKEYIKNHKSPPL

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.3

36.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

83.4

0.75

0.8

77.5

35.7

Minor 5ss

43.4

-0.7

2.8

55.2

Minor BPS

54.5

0.22

1.7

70.2

40.8

Associated Gene:

Gene:

C19orf44

Ensembl Gene ID:

ENSAPLG00000010741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011177

3142283 - 3145948

3666