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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3149221_3149714_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3149221 - 3149714

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TCTATTTCCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATT

Flanking Amino Acid:

RRSRSRSPTPPSSAGLGSSS

Intron Amino Acid Position:

805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.4

70.1

43.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.1

0.63

0.8

77.3

31.3

Minor 5ss

55.8

0.2

2.7

78.1

36.5

Minor BPS

78.1

0.96

86.75

33.6

Associated Gene:

Gene:

CHERP

Ensembl Gene ID:

ENSAPLG00000010773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011255

3147177 - 3159345

12169