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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3150951_3151744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3150951 - 3151744

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TGACACATGACA

Flanking Amino Acid:

PAGLMAPLVKLEDHEYKPLD

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

29.9

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

76.5

0.6

36.8

Minor 5ss

-1.5

3.3

50.9

39.6

Minor BPS

47.7

-0.1

1.8

60.26

38.5

Associated Gene:

Gene:

CHERP

Ensembl Gene ID:

ENSAPLG00000010773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011255

3147177 - 3159345

12169