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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3154278_3154685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3154278 - 3154685

Intron Length:

408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCAAGC

5'SS Class:

major

3'SS Sequence:

CTTTTACCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TTACTTTTACCA

Flanking Amino Acid:

HPVAPWGQQQGPPHCPPWNN

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.2

62.5

42.3

Major BPS

74.2

0.6

39.4

Major PPT

75.1

0.56

0.9

37.8

Minor 5ss

45.5

-0.5

2.7

61.4

Minor BPS

58.2

0.25

1.6

68.92

37.5

Associated Gene:

Gene:

CHERP

Ensembl Gene ID:

ENSAPLG00000010773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011255

3147177 - 3159345

12169