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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3155466_3156103_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3155466 - 3156103

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CTCACTTTATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTCTCCTCAATT

Flanking Amino Acid:

SPALGLGQYQANLITEYATV

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.1

73.5

37.5

Major BPS

0.87

0.8

85.6

Major PPT

74.4

0.55

0.9

73.3

35.7

Minor 5ss

30.9

-2.2

2.7

35.9

40.8

Minor BPS

75.6

0.88

1.5

88.16

37.4

Associated Gene:

Gene:

CHERP

Ensembl Gene ID:

ENSAPLG00000010773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011255

3147177 - 3159345

12169