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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3156665_3157028_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3156665 - 3157028

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

ACAGCAGTAACT

Flanking Amino Acid:

IYLINDVLHHCQRKQARDLL

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

84.3

33.3

Major BPS

54.4

0.11

1.2

36.4

Major PPT

79.6

0.67

81.9

27.3

Minor 5ss

38.3

-1.3

3.4

54.5

43.9

Minor BPS

45.7

-0.2

2.3

64.17

45.8

Associated Gene:

Gene:

CHERP

Ensembl Gene ID:

ENSAPLG00000010773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011255

3147177 - 3159345

12169