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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3158498_3159030_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3158498 - 3159030

Intron Length:

533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CTTTGTCTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAG

U12 Branch Point Sequence:

CTTGCTTTAAGA

Flanking Amino Acid:

KYKLALEQQQLLCKQSQDIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.3

45.2

Major BPS

63.3

0.33

1.6

73.3

39.1

Major PPT

76.3

0.59

72.2

37.9

Minor 5ss

27.6

-2.6

26.6

36.9

Minor BPS

61.2

0.35

1.8

70.26

42.8

Associated Gene:

Gene:

CHERP

Ensembl Gene ID:

ENSAPLG00000010773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011255

3147177 - 3159345

12169