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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3167968_3168813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3167968 - 3168813

Intron Length:

846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCGTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CCCACCGAAATT

Flanking Amino Acid:

WRVPVSYAHTVKATMPIWVV

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

0.62

1.4

85.7

34.9

Major PPT

82.4

0.73

0.8

80.3

31.6

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

42.5

-0.4

2.2

55.31

47.4

Associated Gene:

Gene:

SLC35E1

Ensembl Gene ID:

ENSAPLG00000011233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047081

3165127 - 3169231

4105

ENSAPLT00000011687

3165127 - 3169326

4200