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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3201166_3203229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3201166 - 3203229

Intron Length:

2064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTGCG

5'SS Class:

major

3'SS Sequence:

ATTTGCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATTTGCTTCACA

Flanking Amino Acid:

VSVLYLKYEPGAVEMSRKSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.4

62.9

40.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.2

0.66

0.9

72.8

36.9

Minor 5ss

-2.6

3.1

32.7

42.2

Minor BPS

60.6

0.33

2.2

77.53

39.6

Associated Gene:

Gene:

TMEM38A

Ensembl Gene ID:

ENSAPLG00000024207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025000

3201042 - 3205984

4943