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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3203387_3203969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3203387 - 3203969

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GGGTCCTTAAAC

Flanking Amino Acid:

NSSVILATAIWYLIFFCPMN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.4

0.82

0.8

78.6

39.1

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

68.9

0.57

1.4

69.68

41.1

Associated Gene:

Gene:

TMEM38A

Ensembl Gene ID:

ENSAPLG00000024207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025000

3201042 - 3205984

4943