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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3228646_3229155_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3228646 - 3229155

Intron Length:

510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTTTT

5'SS Class:

weak_major

3'SS Sequence:

GTTCTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAA

U12 Branch Point Sequence:

GTTCTTTTAACA

Flanking Amino Acid:

LLRPVSGPAKKKMKLRGTKD

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

80.5

Major BPS

58.6

0.22

1.1

59.7

34.6

Major PPT

80.7

0.69

0.9

76.9

Minor 5ss

77.1

0.91

1.7

84.6

33.2

Minor BPS

72.9

0.71

1.1

77.15

33.2

Associated Gene:

Gene:

SIN3B

Ensembl Gene ID:

ENSAPLG00000011724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012275

3225583 - 3236944

11362