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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3229798_3230520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3229798 - 3230520

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

TTATGCTTACTT

Flanking Amino Acid:

ELLQLVTPFLGKFPELFAQF

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.4

32.4

Major BPS

61.3

0.28

30.6

Major PPT

71.3

0.48

1.1

71.9

38.3

Minor 5ss

40.1

-1.1

2.8

44.3

43.6

Minor BPS

59.5

0.38

80.42

41.9

Associated Gene:

Gene:

SIN3B

Ensembl Gene ID:

ENSAPLG00000011724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012275

3225583 - 3236944

11362