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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3230729_3231406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3230729 - 3231406

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTGGG

5'SS Class:

major

3'SS Sequence:

GTCACTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

CTCTGTTCAATG

Flanking Amino Acid:

CSGRTAICKEVLNDTWVSFP

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

61.6

43.1

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

0.49

64.8

41.1

Minor 5ss

38.2

-1.3

3.1

49.7

46.5

Minor BPS

46.1

-0.4

50.4

44.9

Associated Gene:

Gene:

SIN3B

Ensembl Gene ID:

ENSAPLG00000011724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012275

3225583 - 3236944

11362