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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3232123_3232803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3232123 - 3232803

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTGCC

5'SS Class:

strong_major

3'SS Sequence:

CATGTTTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCTTTTCAAACT

Flanking Amino Acid:

PVTAVPVVLKRLKAKEEEWR

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

75.1

33.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

75.2

0.57

69.6

40.4

Minor 5ss

-1.8

3.1

45.2

42.8

Minor BPS

51.7

0.13

75.41

41.9

Associated Gene:

Gene:

SIN3B

Ensembl Gene ID:

ENSAPLG00000011724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012275

3225583 - 3236944

11362