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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3232988_3233209_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3232988 - 3233209

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGATTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TGTCTCTTGATT

Flanking Amino Acid:

LNEIESVYDEHQEQHSEGRS

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

83.8

0.84

73.6

41.8

Major PPT

0.65

0.9

72.3

36.5

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

69.6

0.7

1.2

80.91

34.5

Associated Gene:

Gene:

SIN3B

Ensembl Gene ID:

ENSAPLG00000011724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012275

3225583 - 3236944

11362