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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3234464_3234976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3234464 - 3234976

Intron Length:

513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATGGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTTTTTTAATG

Flanking Amino Acid:

DKLVQNIVRQLHHLVSDDIC

Intron Amino Acid Position:

811

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.8

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.4

0.37

1.2

69.6

39.7

Minor 5ss

-0.8

2.7

60.7

43.6

Minor BPS

64.7

0.32

1.3

61.64

41.7

Associated Gene:

Gene:

SIN3B

Ensembl Gene ID:

ENSAPLG00000011724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012275

3225583 - 3236944

11362