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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3235151_3235429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3235151 - 3235429

Intron Length:

279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CACTTTATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TATCTCGTACCT

Flanking Amino Acid:

RCMADENCFKVMFLQRKGQV

Intron Amino Acid Position:

869

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

75.1

0.62

65.6

Major PPT

74.9

0.56

0.9

69.2

35.3

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

48.7

-0

2.2

74.02

42.7

Associated Gene:

Gene:

SIN3B

Ensembl Gene ID:

ENSAPLG00000011724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012275

3225583 - 3236944

11362