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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3235523_3235839_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3235523 - 3235839

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATACTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTGTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

CTGACTTGAAAT

Flanking Amino Acid:

TQTEDPVEVQHLANYMEQYV

Intron Amino Acid Position:

900

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

73.6

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

79.5

0.66

0.8

76.7

31.9

Minor 5ss

35.6

-1.6

3.2

48.3

47.2

Minor BPS

0.11

1.6

66.72

43.8

Associated Gene:

Gene:

SIN3B

Ensembl Gene ID:

ENSAPLG00000011724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012275

3225583 - 3236944

11362