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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3286868_3290895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3286868 - 3290895

Intron Length:

4028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAC

U12 Branch Point Sequence:

TTTTCTTTACAG

Flanking Amino Acid:

PTAAQYVWLEVFQELAEYDV

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

69.3

0.48

1.1

39.5

Major PPT

92.4

0.95

0.6

87.4

23.1

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

63.6

0.29

1.8

72.3

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012747

3284500 - 3297707

13208