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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3291463_3291918_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3291463 - 3291918

Intron Length:

456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

ACACGCTTGGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

CCTTCCCCAACA

Flanking Amino Acid:

VGHPVLKTTQIDGSAVFDVC

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

55.6

0.13

50.6

38.4

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

0.15

68.3

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012747

3284500 - 3297707

13208