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Intron Name: Anas_platyrhynchos_platyrhynchos_29_329578_330034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

329578 - 330034

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

ACTTTGTGACCA

Flanking Amino Acid:

NLPKLNKLRKLELSDNRISG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

79.3

31.1

Major BPS

75.8

0.64

65.8

Major PPT

76.1

0.59

0.9

31.9

Minor 5ss

28.1

-2.5

2.7

31.6

42.6

Minor BPS

43.8

-0.4

2.3

57.61

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003692

326235 - 331501

5267