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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3311382_3312409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3311382 - 3312409

Intron Length:

1028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTTT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

GCTTTGTGAAGA

Flanking Amino Acid:

QRLEEALDKQMEVLSPLVSV

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

78.8

38.3

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

83.7

0.76

0.9

36.6

Minor 5ss

48.4

-0.1

3.2

72.7

44.5

Minor BPS

43.8

-0.4

2.3

56.01

43.3

Associated Gene:

Gene:

HAUS8

Ensembl Gene ID:

ENSAPLG00000012957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013499

3310155 - 3315742

5588