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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3314444_3315141_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3314444 - 3315141

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTTCTTTTAGTT

Flanking Amino Acid:

VPPQKSKASAGVVSGSLNQS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.9

36.8

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

88.6

0.87

0.6

83.6

24.8

Minor 5ss

37.4

-1.4

3.6

54.1

45.6

Minor BPS

63.3

0.5

1.5

80.64

35.6

Associated Gene:

Gene:

HAUS8

Ensembl Gene ID:

ENSAPLG00000012957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013499

3310155 - 3315742

5588