Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_3343311_3343762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3343311 - 3343762

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGAAAC

5'SS Class:

major

3'SS Sequence:

GTTCCTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

GGTTTTATACAT

Flanking Amino Acid:

RSNTPVEKVYRCSMLDFSFD

Intron Amino Acid Position:

735

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

0.9

71.5

33.8

Major BPS

74.9

0.62

81.3

29.9

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

28.8

-2.4

2.8

35.7

40.8

Minor BPS

45.1

-0.2

1.9

63.19

40.8

Associated Gene:

Gene:

MYO9B

Ensembl Gene ID:

ENSAPLG00000013123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024295

3326283 - 3360746

34464

ENSAPLT00000013764

3326283 - 3360746

34464