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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3457417_3460499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3457417 - 3460499

Intron Length:

3083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTACT

5'SS Class:

major

3'SS Sequence:

TTTGCCTCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

ATTTTCTGAGTA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

78.3

35.6

Major BPS

74.2

0.6

0.9

75.7

Major PPT

78.5

0.64

0.8

70.6

36.2

Minor 5ss

40.8

-1

2.4

53.1

43.6

Minor BPS

57.3

0.23

1.6

70.36

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016437

3455667 - 3475796

20130