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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3461569_3461725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3461569 - 3461725

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGAAG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTGGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AAGTTATTAATT

Flanking Amino Acid:

PSTADSIFLEDAYSISLRSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

71.3

40.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

68.8

0.42

61.5

44.5

Minor 5ss

37.7

-1.4

3.1

47.3

48.3

Minor BPS

60.6

0.41

1.6

72.38

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016437

3455667 - 3475796

20130