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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3461867_3462709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3461867 - 3462709

Intron Length:

843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTTGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

ATTTTTGTATTT

Flanking Amino Acid:

EVIKRQDVIYELMQTEMHHV

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.1

32.7

Major BPS

74.5

0.61

79.6

29.1

Major PPT

70.9

0.47

0.9

63.9

36.7

Minor 5ss

33.9

-1.8

2.9

38.9

40.1

Minor BPS

48.4

-0

2.1

72.97

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016437

3455667 - 3475796

20130