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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3465885_3466705_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3465885 - 3466705

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGAC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTACTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

TGCTTCAAAATC

Flanking Amino Acid:

YWKAASGRLKDILAVLLNDV

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.8

34.7

Major BPS

68.1

0.45

73.5

28.6

Major PPT

73.2

0.52

0.9

67.4

Minor 5ss

28.9

-2.4

3.6

40.1

46.3

Minor BPS

47.6

-0.2

1.9

59.1

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016437

3455667 - 3475796

20130