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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3470398_3470847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3470398 - 3470847

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTACGTTGG

5'SS Class:

major

3'SS Sequence:

TGTCTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAGAT

U12 Branch Point Sequence:

GTATCTCTAGTG

Flanking Amino Acid:

PLDAEEGSQTSDITRLDDNS

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.1

0.31

1.2

54.1

45.4

Major BPS

58.9

0.22

1.2

54.7

43.1

Major PPT

89.8

0.9

0.7

88.2

29.1

Minor 5ss

41.4

-1

3.1

58.4

46.1

Minor BPS

46.8

-0.3

1.9

53.75

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016437

3455667 - 3475796

20130