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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3470905_3471569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3470905 - 3471569

Intron Length:

665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCTCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCC

Flanking Amino Acid:

SDIQPTIESQLVQRIQKLLQ

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.1

28.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.4

0.66

0.7

76.3

25.8

Minor 5ss

46.6

-0.3

2.5

60.6

44.5

Minor BPS

71.4

0.65

1.5

81.41

33.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016437

3455667 - 3475796

20130