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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3471618_3472217_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3471618 - 3472217

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACCAC

5'SS Class:

major

3'SS Sequence:

ATTTCCATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCATTTTGGACT

Flanking Amino Acid:

KLLQLLFSLQAVISQQDSYI

Intron Amino Acid Position:

657

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

65.6

40.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

80.5

0.69

0.9

71.2

38.9

Minor 5ss

37.5

-1.4

3.2

50.1

46.5

Minor BPS

56.8

0.3

1.4

71.52

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016437

3455667 - 3475796

20130