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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3472686_3473427_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3472686 - 3473427

Intron Length:

742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCATGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTTTCCTCATGT

Flanking Amino Acid:

SGTFSPEMGQSQMQSHSVSF

Intron Amino Acid Position:

813

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.8

39.8

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

78.2

0.64

0.8

74.4

29.5

Minor 5ss

33.3

-1.9

3.3

48.8

Minor BPS

58.8

0.36

2.1

84.24

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016437

3455667 - 3475796

20130