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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3473756_3475429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3473756 - 3475429

Intron Length:

1674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTTACAAATCT

Flanking Amino Acid:

SKASHRTDSSASVDQKQLIP

Intron Amino Acid Position:

922

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

87.1

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

86.8

0.83

0.7

85.1

Minor 5ss

38.9

-1.3

2.8

43.1

43.9

Minor BPS

47.3

-0.1

2.3

78.02

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016437

3455667 - 3475796

20130