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Intron Name: Anas_platyrhynchos_platyrhynchos_29_347671_347756_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
347671 - 347756

Intron Length:
86

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAGGTTGG

5'SS Class:
major

3'SS Sequence:
CACTGCCCCACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCAGTAC

U12 Branch Point Sequence:
GGCTCAGTACCC

Flanking Amino Acid:
SKVFVKNPESLFLLEEMRER

Intron Amino Acid Position:
682

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.9
0.59
1.1
61
46.2

Major BPS
45
-0.3
1.4
39.7
40.1

Major PPT
65.5
0.35
0.9
57.2
33.1

Minor 5ss
38.7
-1.3
3.1
49.1
47.1

Minor BPS
41.9
-0.6
2.4
52.83
44.3

Associated Gene:

Gene:
MYO1F

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

343775 - 358085
14311

343775 - 358085
14311

343775 - 358085
14311