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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3496475_3496852_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3496475 - 3496852

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTCCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

CTTTGTCTAACT

Flanking Amino Acid:

PALWKKHSPQLVVHVGVSGM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.2

34.5

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

74.8

0.56

0.8

69.7

31.2

Minor 5ss

28.3

-2.5

3.1

31.3

36.6

Minor BPS

56.3

0.27

2.1

80.09

42.2

Associated Gene:

Gene:

PGPEP1

Ensembl Gene ID:

ENSAPLG00000007370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007648

3489948 - 3497176

7229