Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_352226_352612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

352226 - 352612

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

GCCTCCTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CTGCTCAGCACT

Flanking Amino Acid:

DREIELYQGAAQYENPPHIY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

64.7

46.6

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

70.7

0.47

0.8

61.8

34.9

Minor 5ss

34.8

-1.7

3.4

48.4

47.2

Minor BPS

41.4

-0.5

58.62

44.3

Associated Gene:

Gene:

MYO1F

Ensembl Gene ID:

ENSAPLG00000002919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026003

343775 - 358085

14311

ENSAPLT00000003067

343775 - 358085

14311