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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3632190_3633080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3632190 - 3633080

Intron Length:

891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

GCCTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

ATAAAAATAATT

Flanking Amino Acid:

LSPPSDTSWRRTNSDSALHQ

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

77.3

37.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

81.1

0.7

0.8

72.3

37.8

Minor 5ss

32.4

-2

2.5

39.5

Minor BPS

44.6

-0.3

1.9

64.01

39.4

Associated Gene:

Gene:

CRTC1

Ensembl Gene ID:

ENSAPLG00000010657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021220

3604668 - 3649211

44544

ENSAPLT00000011115

3604668 - 3649211

44544

ENSAPLT00000037235

3604668 - 3649211

44544

ENSAPLT00000035958

3604668 - 3649211

44544