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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3638886_3639419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3638886 - 3639419

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGATTTTAATT

Flanking Amino Acid:

TLSPLSPITQAVAMDALSLE

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

41.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.2

0.79

0.9

90.8

21.8

Minor 5ss

33.2

-1.9

3.4

48.6

47.1

Minor BPS

64.9

0.55

1.2

74.15

37.3

Associated Gene:

Gene:

CRTC1

Ensembl Gene ID:

ENSAPLG00000010657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037235

3604668 - 3649211

44544

ENSAPLT00000035958

3604668 - 3649211

44544

ENSAPLT00000021220

3604668 - 3649211

44544

ENSAPLT00000011115

3604668 - 3649211

44544