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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3641931_3647037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3641931 - 3647037

Intron Length:

5107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGGAC

5'SS Class:

major

3'SS Sequence:

GTTTTGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TGCACCATAAAG

Flanking Amino Acid:

QGFSPGSSPQHSSILGSVFG

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.2

34.3

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

87.1

0.84

0.8

84.6

Minor 5ss

31.2

-2.1

3.6

40.9

Minor BPS

48.9

-0.2

1.9

55.63

44.7

Associated Gene:

Gene:

CRTC1

Ensembl Gene ID:

ENSAPLG00000010657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037235

3604668 - 3649211

44544

ENSAPLT00000011115

3604668 - 3649211

44544