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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3647125_3647961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3647125 - 3647961

Intron Length:

837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTGGTCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

TCCTTTGTACCT

Flanking Amino Acid:

ARQANALSHQLEQFNMIENA

Intron Amino Acid Position:

579

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

57.4

0.18

1.3

65.4

Major PPT

76.7

0.6

0.9

72.7

37.6

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

46.3

-0.2

2.2

65.89

45.8

Associated Gene:

Gene:

CRTC1

Ensembl Gene ID:

ENSAPLG00000010657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037235

3604668 - 3649211

44544

ENSAPLT00000021220

3604668 - 3649211

44544

ENSAPLT00000011115

3604668 - 3649211

44544