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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3648143_3648930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3648143 - 3648930

Intron Length:

788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAG

U12 Branch Point Sequence:

TATTTGCTAAGG

Flanking Amino Acid:

HGNIPNIILTVTGESPPSLS

Intron Amino Acid Position:

639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

55.4

0.13

1.6

63.6

42.5

Major PPT

78.2

0.63

0.7

72.3

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

43.4

-0.6

2.5

56.54

44.8

Associated Gene:

Gene:

CRTC1

Ensembl Gene ID:

ENSAPLG00000010657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021220

3604668 - 3649211

44544

ENSAPLT00000011115

3604668 - 3649211

44544

ENSAPLT00000037235

3604668 - 3649211

44544

ENSAPLT00000035958

3604668 - 3649211

44544